LIFE SCIENCES

Life Sciences

Principal Investigator: Ünal Coskun , Paul Langerhans Institute Dresden of Helmholtz Zentrum München (Germany)

HPC Platform used: SuperMUC of LRZ

Local Project ID: pr48ci

Diabetes reaches epidemic proportions with a major and growing economic impact on the society. An effective treatment requires atomic-level understanding of how insulin acts on cells. Using molecular dynamics simulations, an international team of researchers studied the process of insulin binding to its receptor and the resulting structural changes at atomic scale with cryogenic election microscopy and atomistic MD simulation. The results of these studies were recently published in the Journal of Cell Biology.

Life Sciences

Principal Investigator: Jan Hasenauer , (1)Institute of Computational Biology, Helmholtz Zentrum München - German Research Center for Environmental Health, (2)Center for Mathematics, Technische Universität München, (3)Faculty of Mathematics and Natural Sciences, University of Bonn

HPC Platform used: SuperMUC and SuperMUC-NG of LRZ

Local Project ID: pr62li

Computational mechanistic modelling using systems of ordinary differential equations (ODE) has become an integral tool in systems biology. Parameters of such models are often not known in advance and need to be inferred from experimental data, which is computationally very expensive. The SuperMUC supercomputer enabled researchers from the Helmholtz Zentrum Munich to evaluate state-of-the-art algorithms and to develop novel, more efficient algorithms for parameter estimation from large datasets and relative measurements.